Nextflow workflow report

[prickly_kalman]

Workflow execution completed successfully!
Run times
17-Sep-2024 20:26:22 - 17-Sep-2024 20:38:53 (duration: 12m 31s)
  1431 succeeded  
  0 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run /home/e0012078/packages/sig_attribution_paper_code/common_code/MSA/run_auto_optimised_analysis.nf -profile conda --dataset syn_data --input_tables /home/e0012078/packages/sig_attribution_paper_code/analysis/raw_output/DBS/msa_default/syn/input/Kidney-RCC/non_msi --mutation_types DBS --output_path /home/e0012078/packages/sig_attribution_paper_code/analysis/raw_output/DBS/msa_default/syn/output/Kidney-RCC/non_msi/raw --signature_prefix syn_data --signature_tables /home/e0012078/packages/sig_attribution_paper_code/analysis/raw_output/DBS/msa_default/syn/input/Kidney-RCC/non_msi/syn_data
CPU-Hours
8.5
Launch directory
/home/e0012078/packages/sig_attribution_paper_code/analysis/code/DBS/msa_default/bash/DBS/syn
Work directory
/home/e0012078/packages/sig_attribution_paper_code/analysis/code/DBS/msa_default/bash/DBS/syn/work
Project directory
/home/e0012078/packages/sig_attribution_paper_code/common_code/MSA
Script name
run_auto_optimised_analysis.nf
Script ID
32d735b518c298cf73cab91a33c7b8c8
Workflow session
d1b2a529-5281-4314-99e2-65c2c38ddbfb
Workflow profile
conda
Nextflow version
version 22.10.7, build 5854 (18-02-2023 20:37 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)